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TFTG: A comprehensive database for human transcription factors and their targets 期刊论文
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2024, 卷号: 23, 页码: 1877-1885
作者:  Zhou, Xinyuan;  Zhou, Liwei;  Qian, Fengcui;  Chen, Jiaxin;  Zhang, Yuexin;  Yu, Zhengmin;  Zhang, Jian;  Yang, Yongsan;  Li, Yanyu;  Song, Chao;  Wang, Yuezhu;  Shang, Desi;  Dong, Longlong;  Zhu, Jiang;  Li, Chunquan;  Wang, Qiuyu
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MANUALLY CURATED DATABASE  SUPER-ENHANCERS  CELL  MOUSE  GENE  EXPRESSION  ARCHIVE  PATHWAY  UPDATE  MARKER  
iMeta Conference 2024: Building an innovative scientific research ecosystem for microbiome and One Health 期刊论文
IMETA, 2024, 卷号: 3, 期号: 6
作者:  Wang, Yao;  Hou, Huiyu;  Luo, Hao;  Xun, Jiani;  Ma, Chuang;  Yang, Haifei;  Bai, Defeng;  Yousuf, Salsabeel;  Lyu, Hujie;  Zhang, Tianyuan;  Wan, Xiulin;  Yao, Xiaofang;  Ma, Tengfei;  Zhou, Yuanping;  Zhu, Zhihao;  Zeng, Meiyin;  An, Sanqi;  Bai, Qing;  Bai, Yao;  Cao, Guodong;  Cao, Tingting;  Cao, Yongkai;  Chang, Chihmin;  Chang, Lijia;  Chen, Bo;  Chen, Dai;  Chen, Dijun;  Chen, Hanqing;  Chen, Jiali;  Chen, Jinfeng;  Chen, Wei-Hua;  Chen, Xinhai;  Chen, Yue;  Chen, Zhangran;  Cheng, Cheng;  Cheng, Quan;  Dai, Xi-Jian;  Deng, Chaowen;  Deng, Feilong;  Deng, Jingwen;  Dong, Chang-Sheng;  Dong, Lei;  Duan, Lianhui;  Duan, Yi;  Fan, Qingjie;  Fang, Chao;  Fang, Tingyu;  Fang, Wensheng;  Fang, Zhencheng;  Fu, Min;  Fu, Minjie;  Gao, Cong;  Gao, Hao;  Gao, Weiwei;  Gao, Xinrui;  Gao, Yi-Zhou;  Geng, Yan;  Gong, Wenping;  Gu, Shaohua;  Gu, Xia;  Gu, Zhengquan;  Guo, Jian-Wei;  Guo, Junjie;  Guo, Qiuyan;  Guo, Xiang;  Guo, Xiaoqian;  Han, Dongfei;  Han, Ziyi;  Hao, Yanan;  He, Jiale;  He, Jianquan;  He, Jianyu;  He, Ruolin;  Hou, Guosen;  Hu, Bin;  Hu, Haibo;  Hu, Yi;  Hu, Yongfei;  Hu, Yucan;  Huang, Guanyin;  Huang, Haiyun;  Huang, Jiaomei;  Huang, Shenghui;  Jia, Baolei;  Jian, Xingxing;  Jiang, Chao;  Jiang, Kun;  Jiang, Lanyan;  Jiang, Shuaiming;  Jiao, Jian-Yu;  Jin, Hao;  Jin, Jiajia;  Kong, Siyuan;  Lai, Xinxing;  Leng, Yuxin;  Li, Bang;  Li, Bing;  Li, Fang;  Li, Hao;  Li, Huanjie;  Li, Jing;  Li, Kai;  Li, Lanqi;  Li, Leyuan;  Li, Minghan;  Li, Pengsong;  Li, Wei;  Li, Wei;  Li, Xianyu;  Li Xuemeng;  Li, Yafei;  Li, Yuantao;  Li, Zhi;  Liang, Liqin;  Liang, Rong;  Liang, Zhuobin;  Liu, Qingya;  Liu, Dejian;  Liu, Huiheng;  Liu, Jinchao;  Liu, Li;  Liu, Lihui;  Liu, Moyang;  Liu, Ran;  Liu, Shuai;  Liu, Tianyang;  Liu, Wei;  Liu, Wenjuan;  Liu, Xiaomin;  Liu, Yang;  Liu, Yichen;  Liu, Yina;  Liu, Yuan;  Liu, Zhe;  Liu, Zhipeng;  Liu, Zhiquan;  Long, Chunhao;  Long, Yun;  Lu, Changying;  Lu, Chao;  Lu, Cheng;  Lu, Qi;  Luan, Yaning;  Luo, Peng;  Luo, Sheng;  Ma, Ning;  Ma, Xiao-Ya;  Ma, Yan;  Mao, Wenjun;  Meng, Yuanfa;  Ni, Yan;  Ni, Yawen;  Ning, Kang;  Niu, Dongze;  Peng, Kai;  Peng, Zhengwu;  Qian, Xubo;  Qiu, Zhiguang;  Qu, Hui;  Qu, Zepeng;  Ren, Yan;  Ren, Zhigang;  Shen, Youming;  Shi, Lin;  Shi, Linlin;  Shi, Wenxuan;  Shi, Yongpeng;  Song, Tianyuan;  Song, Xiaohui;  Song, Xiaoming;  Song, Xiaowei;  Su, Qi;  Su, Yufan;  Sun, Lifang;  Sun, Qiang;  Sun, Tiefeng;  Sun, Yunke;  Tang, Hua;  Tang, Wenjing;  Yu, Tao;  Tian, Simon;  Wang, Shuo;  Wang, Bowen;  Wang, Cheng;  Jin, Wang;  Wang, Leli;  Wang, Liangliang;  Wang, Lixiao;  Wang, Mingbang;  Wang, Ming-Ke;  Wang, Pingyi;  Wang, Shaolin;  Wang, Shaopu;  Wang, Xinxia;  Wang, Xueqiang;  Wei, Mi;  Wei, Yan;  Wei, Yanxia;  Wei, Yongjun;  Wen, Chaoliang;  Wen, Xin;  Wu, Linkun;  Wu, Shengru;  Wu, Yuting;  Xia, Shuting;  Xia, Xiaodong;  Xia, Yu;  Xiang, Xionggen;  Xiao, Chuanxing;  Xiao, Weihua;  Xiao, Yingping;  Xie, Ruohan;  Xing, Rui;  Xu, Hui;  Xu, Wei;  Xu, Zhimin;  Xue, Hongliang;  Yan, Chao;  Yan, Qiu-Long;  Yan, Shaofei;  Yan, Xiuchuan;  Yang, Mengli;  Yang, Yufan;  Yang, Zhipeng;  Yang, Ziyuan;  Yao, Guixiang;  Yao, Yanlai;  Yi, Xianfu;  Yin, Chong;  Yin, Mingliang;  Yu, Shicheng;  Yu, Ying;  Yu, Yongyao;  Yuan, Fusong;  Zhai, Shao-Lun;  Zhang, Bo;  Zhang, Chen;  Zhang, Fang;  Zhang, Feng-Li;  Zhang, Hengguo;  Zhang, Jinping;  Zhang, Junya;  Zhang, Kun;  Zhang, Li;  Zhang, Lin;  Zhang, Lingxuan;  Zhang, Meng;  Zhang, Qian;  Zhang, Runan;  Zhang, Tongtong;  Zhang, Tongxue;  Zhang, Weipeng;  Zhang, Yong;  Zhang, Yuchao;  Zhang, Yujun;  Zhang, Zeng;  Zhang, Zhengxiao;  Zhang, Zhi-Feng;  Zhao, Boxi;  Zhao, Yanyan;  Zhao, Yibing;  Zhao, Ziwei;  Zheng, Diwei;  Zheng, Ying;  Zhi, Wenqiang;  Zhong, Jixin;  Zhong, Xiangjian;  Zhou, Wei;  Zhou, Xin;  Zhou, Zhemin;  Zhou, Zhichao;  Zhu, Congmin;  Zhu, Feiying;  Zhu, Xiaodie;  Zou, Yutian;  Zhou, Hongling;  Lei, Lei;  Bi, Yanliang;  Shi, Hubing;  Sun, Hui-Zeng;  Jin, Shuangxia;  Ren, Wenkai;  Dai, Lei;  Wang, Xin;  Lan, Canhui;  Liu, Hongwei;  Liu, Shuang-Jiang;  Yin, Yulong;  Shi, Chun-Lin;  Gan, Ren-You;  Zhao, Fangqing;  Yu, Jun;  Chen, Tong;  Hong, Xin;  Yang, Hua;  Zhang, Bangzhou;  Chen, Shifu;  Li, Xiaodong;  Gao, Yunyun;  Liu, Yong-Xin
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Macro-evolutionary dynamics dominated by dispersal promote the formation of regional biodiversity hotspot-insights from hawkmoths (Lepidoptera: Sphingidae) in South China 期刊论文
DIVERSITY AND DISTRIBUTIONS, 2024
作者:  Wang, Ying;  Yang, Cai-qing;  Zheng, Yu-xuan;  Hao, Meng-di;  Zhu, Chao-dong;  Orr, Michael C.;  Zhang, Ai-bing
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SPECIES RICHNESS  BOTTOM-UP  HABITAT SUITABILITY  INSECT HERBIVORES  MOTHS LEPIDOPTERA  HAINAN ISLAND  DIVERSITY  PATTERNS  CENTERS  DIVERSIFICATION  
π-HuB: the proteomic navigator of the human body 期刊论文
NATURE, 2024, 卷号: 636, 期号: 8042, 页码: 322-331
作者:  He, Fuchu;  Aebersold, Ruedi;  Baker, Mark S.;  Bian, Xiuwu;  Bo, Xiaochen;  Chan, Daniel W.;  Chang, Cheng;  Chen, Luonan;  Chen, Xiangmei;  Chen, Yu-Ju;  Cheng, Heping;  Collins, Ben C.;  Corrales, Fernando;  Cox, Juergen;  Weinan, E.;  Van Eyk, Jennifer E.;  Fan, Jia;  Faridi, Pouya;  Figeys, Daniel;  Gao, George Fu;  Gao, Wen;  Gao, Zu-Hua;  Goda, Keisuke;  Goh, Wilson Wen Bin;  Gu, Dongfeng;  Guo, Changjiang;  Guo, Tiannan;  He, Yuezhong;  Heck, Albert J. R.;  Hermjakob, Henning;  Hunter, Tony;  Iyer, Narayanan Gopalakrishna;  Jiang, Ying;  Jimenez, Connie R.;  Joshi, Lokesh;  Kelleher, Neil L.;  Li, Ming;  Li, Yang;  Lin, Qingsong;  Liu, Cui Hua;  Liu, Fan;  Liu, Guang-Hui;  Liu, Yansheng;  Liu, Zhihua;  Low, Teck Yew;  Lu, Ben;  Mann, Matthias;  Meng, Anming;  Moritz, Robert L.;  Nice, Edouard;  Ning, Guang;  Omenn, Gilbert S.;  Overall, Christopher M.;  Palmisano, Giuseppe;  Peng, Yaojin;  Pineau, Charles;  Poon, Terence Chuen Wai;  Purcell, Anthony W.;  Qiao, Jie;  Reddel, Roger R.;  Robinson, Phillip J.;  Roncada, Paola;  Sander, Chris;  Sha, Jiahao;  Song, Erwei;  Srivastava, Sanjeeva;  Sun, Aihua;  Sze, Siu Kwan;  Tang, Chao;  Tang, Liujun;  Tian, Ruijun;  Vizcaino, Juan Antonio;  Wang, Chanjuan;  Wang, Chen;  Wang, Xiaowen;  Wang, Xinxing;  Wang, Yan;  Weiss, Tobias;  Wilhelm, Mathias;  Winkler, Robert;  Wollscheid, Bernd;  Wong, Limsoon;  Xie, Linhai;  Xie, Wei;  Xu, Tao;  Xu, Tianhao;  Yan, Liying;  Yang, Jing;  Yang, Xiao;  Yates, John;  Yun, Tao;  Zhai, Qiwei;  Zhang, Bing;  Zhang, Hui;  Zhang, Lihua;  Zhang, Lingqiang;  Zhang, Pingwen;  Zhang, Yukui;  Zheng, Yu Zi;  Zhong, Qing;  Zhu, Yunping;  Tan, Chris Soon Heng;  Gao, Mingxia;  Gao, Qiang;  Gao, Yushun;  Guo, Xuejiang;  He, Jie;  He, Jun;  He, Qing-Yu;  Hou, Jinlin;  Huang, Canhua;  Jia, Chenxi;  Kuster, Bernhard;  Li, Chaoying;  Li, Dong;  Li, Yanchang;  Liu, Siqi;  Liu, Xiaonan;  Liu, Ya;  Liu, Zhongyang;  Lu, Haojie;  Nie, Yongzhan;  Okada, Mariko;  Qian, Guojun;  Qin, Hongqiang;  Rao, Yu;  Rao, Zihe;  Ren, Xianwen;  Ren, Yan;  Shen, Feng;  Shen, Lin;  Su, Shicheng;  Tan, Minjia;  Tang, Ben Zhong;  Tao, Sheng-Ce;  Wang, Jian;  Wang, Tong;  Wei, Liming;  Wong, Catherine C. L.;  Xie, Xiaoliang Sunney;  Xu, Li;  Xu, Ping;  Yang, Huanming;  Yang, Jianjun;  Ye, Mingliang;  Ying, Wantao;  Yu, Xiaobo;  Yuan, Yaxiang;  Zeng, Qingcun;  Zhan, Qimin;  Zhang, Xiaofei;  Zhang, Xu;  Zhang, Ying;  Zhong, Nan-Shan;  Zhou, Feng;  Zhu, Yi;  Zhang, Zemin
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CHINA PUSHES  DISEASE  ATLAS  DRAFT  
Human vascularized macrophage-islet organoids to model immune-mediated pancreatic R cell pyroptosis upon viral infection 期刊论文
CELL STEM CELL, 2024, 卷号: 31, 期号: 11
作者:  Yang, Liuliu;  Han, Yuling;  Zhang, Tuo;  Dong, Xue;  Ge, Jian;  Roy, Aadita;  Zhu, Jiajun;  Lu, Tiankun;  Vandana, J. Jeya;  de Silva, Neranjan;  Robertson, Catherine C.;  Xiang, Jenny Z.;  Pan, Chendong;  Sun, Yanjie;  Que, Jianwen;  Evans, Todd;  Liu, Chengyang;  Wang, Wei;  Naji, Ali;  Parker, Stephen C. J.;  Schwartz, Robert E.;  Chen, Shuibing
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BETA-CELL  ENDOTHELIAL-CELLS  MONOCLONAL-ANTIBODY  TWEAK/FN14 PATHWAY  GENE-EXPRESSION  SEQUENCING DATA  STEM-CELLS  T-CELLS  RNA-SEQ  DIFFERENTIATION  
ScImmOmics: a manually curated resource of single-cell multi-omics immune data 期刊论文
NUCLEIC ACIDS RESEARCH, 2024
作者:  Li, Yan-Yu;  Zhou, Li-Wei;  Qian, Feng-Cui;  Fang, Qiao-Li;  Yu, Zheng-Min;  Cui, Ting;  Dong, Fu-Juan;  Cai, Fu-Hong;  Yu, Ting-Ting;  Li, Li-Dong;  Wang, Qiu-Yu;  Zhu, Yan-Bing;  Tang, Hui-Fang;  Hu, Bao-Yang;  Li, Chun-Quan
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DENDRITIC CELLS  ACTIVATION  EXPRESSION  MONOCYTE  MARKER  LANDSCAPE  DYNAMICS  FAMILY  CD69  
Deep Ancestral Introgressions between Ovine Species Shape Sheep Genomes via Argali-Mediated Gene Flow 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2024, 卷号: 41, 期号: 11
作者:  Lv, Feng-Hua;  Wang, Dong-Feng;  Zhao, Si-Yi;  Lv, Xiao-Yang;  Sun, Wei;  Nielsen, Rasmus;  Li, Meng-Hua
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WILD RELATIVES  EVOLUTION  ALIGNMENT  HISTORY  DOMESTICATION  ADAPTATION  PARAMETERS  PATTERNS  ORIGINS  
GeneCompass: deciphering universal gene regulatory mechanisms with a knowledge-informed cross-species foundation model 期刊论文
CELL RESEARCH, 2024, 页码: 3054-3066
作者:  Yang, Xiaodong;  Liu, Guole;  Feng, Guihai;  Bu, Dechao;  Wang, Pengfei;  Jiang, Jie;  Chen, Shubai;  Yang, Qinmeng;  Miao, Hefan;  Zhang, Yiyang;  Man, Zhenpeng;  Liang, Zhongming;  Wang, Zichen;  Li, Yaning;  Li, Zheng;  Liu, Yana;  Tian, Yao;  Liu, Wenhao;  Li, Cong;  Li, Ao;  Dong, Jingxi;  Hu, Zhilong;  Fang, Chen;  Cui, Lina;  Deng, Zixu;  Jiang, Haiping;  Cui, Wentao;  Zhang, Jiahao;  Yang, Zhaohui;  Li, Handong;  He, Xingjian;  Zhong, Liqun;  Zhou, Jiaheng;  Wang, Zijian;  Long, Qingqing;  Xu, Ping;  Wang, Hongmei;  Meng, Zhen;  Wang, Xuezhi;  Wang, Yangang;  Wang, Yong;  Zhang, Shihua;  Guo, Jingtao;  Zhao, Yi;  Zhou, Yuanchun;  Li, Fei;  Liu, Jing;  Chen, Yiqiang;  Yang, Ge;  Li, Xin
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EXPRESSION  NETWORKS  
Metformin decelerates aging clock in male monkeys 期刊论文
CELL, 2024, 卷号: 187, 期号: 22
作者:  Yang, Yuanhan;  Lu, Xiaoyong;  Liu, Ning;  Ma, Shuai;  Zhang, Hui;  Zhang, Zhiyi;  Yang, Kuan;  Jiang, Mengmeng;  Zheng, Zikai;  Qiao, Yicheng;  Hu, Qinchao;  Huang, Ying;  Zhang, Yiyuan;  Xiong, Muzhao;  Liu, Lixiao;  Jiang, Xiaoyu;  Reddy, Pradeep;  Dong, Xueda;  Xu, Fanshu;  Wang, Qiaoran;  Zhao, Qian;  Lei, Jinghui;  Sun, Shuhui;  Jing, Ying;  Li, Jingyi;  Cai, Yusheng;  Fan, Yanling;  Yan, Kaowen;  Jing, Yaobin;  Haghani, Amin;  Xing, Mengen;  Zhang, Xuan;  Zhu, Guodong;  Song, Weihong;  Horvath, Steve;  Esteban, Concepcion Rodriguez;  Song, Moshi;  Wang, Si;  Zhao, Guoguang;  Li, Wei;  Belmonte, Juan Carlos Izpisua;  Qu, Jing;  Zhang, Weiqi;  Liu, Guang-Hui
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HUMAN PLASMA PROTEOME  SOFTWARE  PATHWAY  MORTALITY  PACKAGE  MODELS  IMAGE  
Multi-omics landscape and molecular basis of radiation tolerance in a tardigrade 期刊论文
SCIENCE, 2024, 卷号: 386, 期号: 6720
作者:  Li, Lei;  Ge, Zhengping;  Liu, Shihao;  Zheng, Kun;  Li, Yaqi;  Chen, Kaiqi;  Fu, Yesheng;  Lei, Xiaoguang;  Cui, Zeling;  Wang, Yifan;  Huang, Jin;  Liu, Yanyan;  Duan, Mingwang;  Sun, Zimei;  Chen, Jun;  Li, Liangwei;  Shen, Pan;  Wang, Guibin;  Chen, Junmiao;  Li, Ruochong;  Li, Chaoran;  Yang, Zhixiang;  Ning, Yifan;  Luo, Arong;  Chen, Baoyu;  Seim, Inge;  Liu, Xin;  Wang, Fei;  Yao, Yishan;  Guo, Fusheng;  Yang, Maojun;  Liu, Cui Hua;  Fan, Guangyi;  Wang, Lizhi;  Yang, Dong;  Zhang, Lingqiang
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HORIZONTAL GENE-TRANSFER  SPECIES DELIMITATION  BETALAINS  BIOSYNTHESIS  TRANSLOCATION  PROTEINS  GENOMICS  SURVIVAL  MICE  TREE